Your process to turn your raw data into organized and functional data starts with data parsing with the Parse Experiment Data tool.
This tool parses your file (*.csv or *.xlsx) with experiment data and stores the content in Data Grid(s). The Data Parsers are customizable and are set up as Node-RED flows at the Integration Server. Once the data is correctly parsed and successfully stored in Data Grid(s) you can run the import experiment data into Assay.
Accessing the tool:
You can access the data parsing tool by first going to Tools Library of the Teselagen platform. Once you click on it, the Tool Library will open up.
Go to the search bar, type Parse Experiment Data, and launch the tool to initiate the process.
Uploading your file:
Once you click the Launch Tool button, it will upon you the Upload Data File screen.
You can either click on the Up arrow icon to upload the experimental data file or just drag the file to the uploading area.
After you've uploaded the file, click on the Select a parser drop-down in the Select data parser file section. Once you've imported the spreadsheet, that file gets parsed through a node-red flow.
Only CSVs that are appropriately tabulated can proceed without a parser.
The Node-RED flow* is a part of Teselagen's integration which allows users to create their custom logic-flows in the node-red interface.
Your file will be transferred to the flow created on node-red, and it will parse it and generate data grids (go to the end of this document to see how you can access Node-RED). You can import more parsers via Node-RED.
Once the grids are generated, your data file will be created will be created which you can access by clicking on the hyperlinked name as indicated by 1 in the image below.
This will open up the Data Grid library section of the Data Analysis Toolkit, and you can find your parsed file as indicated by the file's name.
Read the complete Data Import Pipeline here.